Stream temperature was measured at the time of sampling. A reach 40 times the wetted width of the stream was delineated for sampling. Both organizations used a similar sampling protocol. Environmental Protection Agency's Environmental Management and Assessment Program-Western Pilot Project (EMAP-West) from 2000 to 2002, and the second data set was collected in western Oregon by the Oregon Department of Environmental Quality (DEQ) from 1999 to 2000 (Figures 22 and 23). Two sample data sets are provided here to illustrate the analysis methods described in this module. The library can be installed by typing at the R prompt: The library also contains the script that computes maximum likelihood inference and other tools. To estimate multivariate taxon-environment relationships, or to format any taxon-environment relationship correctly for maximum likelihood inferences, you will need to use the scripts provided in the R library bio.infer.
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